Cluster: HRGMv2_3569_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3569
- CGC Family ID: CGCFAM_10394
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3569_2 | HRGMv2_3569_2_336 | 362277 | 364946 | - | 3.A.1.122.2 |
| NULL(UNKNOWN) | HRGMv2_3569_2 | HRGMv2_3569_2_337 | 365153 | 365614 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3569_2 | HRGMv2_3569_2_338 | 365723 | 367018 | - | UPF0004 | Radical_SAM |
| TC | HRGMv2_3569_2 | HRGMv2_3569_2_339 | 367223 | 368212 | - | 1.A.33.1.5 |
| pfam | HRGMv2_3569_2 | HRGMv2_3569_2_340 | 368643 | 370979 | + | MutS_V | Smr |
| TF | HRGMv2_3569_2 | HRGMv2_3569_2_341 | 371328 | 371990 | - | LexA_DNA_bind |
| CAZyme | HRGMv2_3569_2 | HRGMv2_3569_2_342 | 372215 | 373081 | + | CBM25 |
Gene ID: HRGMv2_3569_2_336
Type: TC
Location: 362277 - 364946 (-)
Type: TC
Location: 362277 - 364946 (-)
Gene ID: HRGMv2_3569_2_337
Type:
Location: 365153 - 365614 (-)
Type:
Location: 365153 - 365614 (-)
Gene ID: HRGMv2_3569_2_338
Type: pfam
Location: 365723 - 367018 (-)
Type: pfam
Location: 365723 - 367018 (-)
Gene ID: HRGMv2_3569_2_339
Type: TC
Location: 367223 - 368212 (-)
Type: TC
Location: 367223 - 368212 (-)
Gene ID: HRGMv2_3569_2_340
Type: pfam
Location: 368643 - 370979 (+)
Type: pfam
Location: 368643 - 370979 (+)
Gene ID: HRGMv2_3569_2_341
Type: TF
Location: 371328 - 371990 (-)
Type: TF
Location: 371328 - 371990 (-)
Gene ID: HRGMv2_3569_2_342
Type: CAZyme
Location: 372215 - 373081 (+)
Type: CAZyme
Location: 372215 - 373081 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
UMGS1994
Species
UMGS1994 sp900556975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.