Cluster: HRGMv2_3567_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3567
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3567_8 | HRGMv2_3567_8_20 | 21087 | 21884 | - | 2.A.5.5.2 |
| CAZyme | HRGMv2_3567_8 | HRGMv2_3567_8_21 | 22184 | 23086 | - | CE4 |
| NULL(UNKNOWN) | HRGMv2_3567_8 | HRGMv2_3567_8_22 | 23109 | 23909 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3567_8 | HRGMv2_3567_8_23 | 24035 | 25795 | + | NFACT-R_1 | NFACT_N |
| TC | HRGMv2_3567_8 | HRGMv2_3567_8_24 | 25913 | 26872 | - | 1.A.35.3.1 |
Gene ID: HRGMv2_3567_8_20
Type: TC
Location: 21087 - 21884 (-)
Type: TC
Location: 21087 - 21884 (-)
Gene ID: HRGMv2_3567_8_21
Type: CAZyme
Location: 22184 - 23086 (-)
Type: CAZyme
Location: 22184 - 23086 (-)
Gene ID: HRGMv2_3567_8_22
Type:
Location: 23109 - 23909 (-)
Type:
Location: 23109 - 23909 (-)
Gene ID: HRGMv2_3567_8_23
Type: pfam
Location: 24035 - 25795 (+)
Type: pfam
Location: 24035 - 25795 (+)
Gene ID: HRGMv2_3567_8_24
Type: TC
Location: 25913 - 26872 (-)
Type: TC
Location: 25913 - 26872 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-269
Species
CAG-269 sp900556345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.