Cluster: HRGMv2_3567_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3567
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3567_6 | HRGMv2_3567_6_88 | 84800 | 85648 | + | 3.A.1.121.4 |
| pfam | HRGMv2_3567_6 | HRGMv2_3567_6_89 | 85712 | 86692 | - | Phage_integrase | Phage_int_SAM_1 | Phage_int_SAM_4 |
| CAZyme | HRGMv2_3567_6 | HRGMv2_3567_6_90 | 86850 | 87740 | + | CE4 |
| pfam | HRGMv2_3567_6 | HRGMv2_3567_6_91 | 87839 | 88354 | - | DUF1836 |
| TC | HRGMv2_3567_6 | HRGMv2_3567_6_92 | 88475 | 90196 | + | 4.C.1.1.4 |
Gene ID: HRGMv2_3567_6_88
Type: TC
Location: 84800 - 85648 (+)
Type: TC
Location: 84800 - 85648 (+)
Gene ID: HRGMv2_3567_6_89
Type: pfam
Location: 85712 - 86692 (-)
Type: pfam
Location: 85712 - 86692 (-)
Gene ID: HRGMv2_3567_6_90
Type: CAZyme
Location: 86850 - 87740 (+)
Type: CAZyme
Location: 86850 - 87740 (+)
Gene ID: HRGMv2_3567_6_91
Type: pfam
Location: 87839 - 88354 (-)
Type: pfam
Location: 87839 - 88354 (-)
Gene ID: HRGMv2_3567_6_92
Type: TC
Location: 88475 - 90196 (+)
Type: TC
Location: 88475 - 90196 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-269
Species
CAG-269 sp900556345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.