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Cluster: HRGMv2_3567_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3567_5 HRGMv2_3567_5_55 52185 53363 + 9.B.142.3.8
CAZyme HRGMv2_3567_5 HRGMv2_3567_5_56 53385 54338 + GT2
pfam HRGMv2_3567_5 HRGMv2_3567_5_57 54369 55880 + Glucos_trans_II
pfam HRGMv2_3567_5 HRGMv2_3567_5_58 55925 58969 + Hydrolase
CAZyme HRGMv2_3567_5 HRGMv2_3567_5_59 59037 62198 + GT2
TC HRGMv2_3567_5 HRGMv2_3567_5_60 62195 62941 + 3.A.1.103.4
TC HRGMv2_3567_5 HRGMv2_3567_5_61 62956 63729 + 3.A.1.103.1
CAZyme HRGMv2_3567_5 HRGMv2_3567_5_62 63747 66005 + GT2 | GT4
CAZyme HRGMv2_3567_5 HRGMv2_3567_5_63 66159 68774 + CBM13 | CBM13
CAZyme HRGMv2_3567_5 HRGMv2_3567_5_64 68792 72880 + CBM13 | CBM13 | CBM13
Gene ID: HRGMv2_3567_5_55
Type: TC
Location: 52185 - 53363 (+)
Gene ID: HRGMv2_3567_5_56
Type: CAZyme
Location: 53385 - 54338 (+)
Gene ID: HRGMv2_3567_5_57
Type: pfam
Location: 54369 - 55880 (+)
Gene ID: HRGMv2_3567_5_58
Type: pfam
Location: 55925 - 58969 (+)
Gene ID: HRGMv2_3567_5_59
Type: CAZyme
Location: 59037 - 62198 (+)
Gene ID: HRGMv2_3567_5_60
Type: TC
Location: 62195 - 62941 (+)
Gene ID: HRGMv2_3567_5_61
Type: TC
Location: 62956 - 63729 (+)
Gene ID: HRGMv2_3567_5_62
Type: CAZyme
Location: 63747 - 66005 (+)
Gene ID: HRGMv2_3567_5_63
Type: CAZyme
Location: 66159 - 68774 (+)
Gene ID: HRGMv2_3567_5_64
Type: CAZyme
Location: 68792 - 72880 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
TANB77
→
Family
CAG-508
→
Genus
CAG-269
→
Species
CAG-269 sp900556345

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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