Cluster: HRGMv2_3567_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3567
- CGC Family ID: CGCFAM_00002
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3567_5 | HRGMv2_3567_5_21 | 19120 | 19842 | + | 9.B.18.1.2 |
| CAZyme | HRGMv2_3567_5 | HRGMv2_3567_5_22 | 19860 | 20963 | + | GT4 |
| STP | HRGMv2_3567_5 | HRGMv2_3567_5_23 | 20975 | 22159 | + | Fer4 |
| CAZyme | HRGMv2_3567_5 | HRGMv2_3567_5_24 | 22156 | 23265 | + | GT4 |
| pfam | HRGMv2_3567_5 | HRGMv2_3567_5_25 | 23268 | 24341 | + | PS_pyruv_trans |
| CAZyme | HRGMv2_3567_5 | HRGMv2_3567_5_26 | 24376 | 25395 | + | GT2 |
Gene ID: HRGMv2_3567_5_21
Type: TC
Location: 19120 - 19842 (+)
Type: TC
Location: 19120 - 19842 (+)
Gene ID: HRGMv2_3567_5_22
Type: CAZyme
Location: 19860 - 20963 (+)
Type: CAZyme
Location: 19860 - 20963 (+)
Gene ID: HRGMv2_3567_5_23
Type: STP
Location: 20975 - 22159 (+)
Type: STP
Location: 20975 - 22159 (+)
Gene ID: HRGMv2_3567_5_24
Type: CAZyme
Location: 22156 - 23265 (+)
Type: CAZyme
Location: 22156 - 23265 (+)
Gene ID: HRGMv2_3567_5_25
Type: pfam
Location: 23268 - 24341 (+)
Type: pfam
Location: 23268 - 24341 (+)
Gene ID: HRGMv2_3567_5_26
Type: CAZyme
Location: 24376 - 25395 (+)
Type: CAZyme
Location: 24376 - 25395 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-269
Species
CAG-269 sp900556345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.