Cluster: HRGMv2_3567_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3567
- CGC Family ID: CGCFAM_02811
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3567_3 | HRGMv2_3567_3_11 | 10524 | 11339 | - | CE4 |
| STP | HRGMv2_3567_3 | HRGMv2_3567_3_12 | 11411 | 12454 | - | HD |
| TF | HRGMv2_3567_3 | HRGMv2_3567_3_13 | 12827 | 13546 | + | LytTR |
| TC | HRGMv2_3567_3 | HRGMv2_3567_3_14 | 13536 | 14876 | + | 9.B.14.1.13 |
Gene ID: HRGMv2_3567_3_11
Type: CAZyme
Location: 10524 - 11339 (-)
Type: CAZyme
Location: 10524 - 11339 (-)
Gene ID: HRGMv2_3567_3_12
Type: STP
Location: 11411 - 12454 (-)
Type: STP
Location: 11411 - 12454 (-)
Gene ID: HRGMv2_3567_3_13
Type: TF
Location: 12827 - 13546 (+)
Type: TF
Location: 12827 - 13546 (+)
Gene ID: HRGMv2_3567_3_14
Type: TC
Location: 13536 - 14876 (+)
Type: TC
Location: 13536 - 14876 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-269
Species
CAG-269 sp900556345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.