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Cluster: HRGMv2_3566_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3566_4 HRGMv2_3566_4_136 135413 136351 + GT2
pfam HRGMv2_3566_4 HRGMv2_3566_4_137 136511 137188 + Rib_5-P_isom_A
pfam HRGMv2_3566_4 HRGMv2_3566_4_138 137414 138202 + ABC2_membrane
TC HRGMv2_3566_4 HRGMv2_3566_4_139 138211 138945 + 3.A.1.103.1
CAZyme HRGMv2_3566_4 HRGMv2_3566_4_140 138962 140989 + GT2
CAZyme HRGMv2_3566_4 HRGMv2_3566_4_141 141011 142312 + GT4
CAZyme HRGMv2_3566_4 HRGMv2_3566_4_142 142330 144801 + GT4
pfam HRGMv2_3566_4 HRGMv2_3566_4_143 144816 146231 + Glyco_transf_4 | Glyco_trans_4_2
CAZyme HRGMv2_3566_4 HRGMv2_3566_4_144 146248 146958 + GT26
pfam HRGMv2_3566_4 HRGMv2_3566_4_145 146982 148094 + Epimerase_2
TC HRGMv2_3566_4 HRGMv2_3566_4_146 148113 149195 + 9.B.146.1.1
Gene ID: HRGMv2_3566_4_136
Type: CAZyme
Location: 135413 - 136351 (+)
Gene ID: HRGMv2_3566_4_137
Type: pfam
Location: 136511 - 137188 (+)
Gene ID: HRGMv2_3566_4_138
Type: pfam
Location: 137414 - 138202 (+)
Gene ID: HRGMv2_3566_4_139
Type: TC
Location: 138211 - 138945 (+)
Gene ID: HRGMv2_3566_4_140
Type: CAZyme
Location: 138962 - 140989 (+)
Gene ID: HRGMv2_3566_4_141
Type: CAZyme
Location: 141011 - 142312 (+)
Gene ID: HRGMv2_3566_4_142
Type: CAZyme
Location: 142330 - 144801 (+)
Gene ID: HRGMv2_3566_4_143
Type: pfam
Location: 144816 - 146231 (+)
Gene ID: HRGMv2_3566_4_144
Type: CAZyme
Location: 146248 - 146958 (+)
Gene ID: HRGMv2_3566_4_145
Type: pfam
Location: 146982 - 148094 (+)
Gene ID: HRGMv2_3566_4_146
Type: TC
Location: 148113 - 149195 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
TANB77
→
Family
CAG-508
→
Genus
CAG-492
→
Species
CAG-492 sp900557195

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_3566_4_145 vegetarian > omnivore 2.90871 0.02034
HRGMv2_3566_4_145 vegetarian > vegan 2.28038 0.04112

🧭 Explore Read Mapping of CGC

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