Cluster: HRGMv2_3566_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3566
- CGC Family ID: CGCFAM_00002
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3566_4 | HRGMv2_3566_4_50 | 50479 | 51840 | + | 9.B.145.1.2 |
| pfam | HRGMv2_3566_4 | HRGMv2_3566_4_51 | 51866 | 52366 | + | VanZ |
| TC | HRGMv2_3566_4 | HRGMv2_3566_4_52 | 52573 | 53292 | + | 9.B.18.1.2 |
| CAZyme | HRGMv2_3566_4 | HRGMv2_3566_4_53 | 53298 | 54374 | + | GT4 |
| pfam | HRGMv2_3566_4 | HRGMv2_3566_4_54 | 54385 | 55641 | + | PS_pyruv_trans |
| CAZyme | HRGMv2_3566_4 | HRGMv2_3566_4_55 | 55657 | 56817 | + | GT4 |
Gene ID: HRGMv2_3566_4_50
Type: TC
Location: 50479 - 51840 (+)
Type: TC
Location: 50479 - 51840 (+)
Gene ID: HRGMv2_3566_4_51
Type: pfam
Location: 51866 - 52366 (+)
Type: pfam
Location: 51866 - 52366 (+)
Gene ID: HRGMv2_3566_4_52
Type: TC
Location: 52573 - 53292 (+)
Type: TC
Location: 52573 - 53292 (+)
Gene ID: HRGMv2_3566_4_53
Type: CAZyme
Location: 53298 - 54374 (+)
Type: CAZyme
Location: 53298 - 54374 (+)
Gene ID: HRGMv2_3566_4_54
Type: pfam
Location: 54385 - 55641 (+)
Type: pfam
Location: 54385 - 55641 (+)
Gene ID: HRGMv2_3566_4_55
Type: CAZyme
Location: 55657 - 56817 (+)
Type: CAZyme
Location: 55657 - 56817 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-492
Species
CAG-492 sp900557195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.