Cluster: HRGMv2_3566_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3566
- CGC Family ID: CGCFAM_00084
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3566_1 | HRGMv2_3566_1_110 | 98567 | 100378 | - | 3.A.7.7.1 |
| pfam | HRGMv2_3566_1 | HRGMv2_3566_1_111 | 100743 | 101060 | - | DUF6514 |
| CAZyme | HRGMv2_3566_1 | HRGMv2_3566_1_112 | 101266 | 101535 | - | GT28 |
| CAZyme | HRGMv2_3566_1 | HRGMv2_3566_1_113 | 101480 | 102385 | - | GT28 |
| TC | HRGMv2_3566_1 | HRGMv2_3566_1_114 | 102503 | 103663 | - | 2.A.103.1.3 |
| TC | HRGMv2_3566_1 | HRGMv2_3566_1_115 | 103927 | 104766 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_3566_1_110
Type: TC
Location: 98567 - 100378 (-)
Type: TC
Location: 98567 - 100378 (-)
Gene ID: HRGMv2_3566_1_111
Type: pfam
Location: 100743 - 101060 (-)
Type: pfam
Location: 100743 - 101060 (-)
Gene ID: HRGMv2_3566_1_112
Type: CAZyme
Location: 101266 - 101535 (-)
Type: CAZyme
Location: 101266 - 101535 (-)
Gene ID: HRGMv2_3566_1_113
Type: CAZyme
Location: 101480 - 102385 (-)
Type: CAZyme
Location: 101480 - 102385 (-)
Gene ID: HRGMv2_3566_1_114
Type: TC
Location: 102503 - 103663 (-)
Type: TC
Location: 102503 - 103663 (-)
Gene ID: HRGMv2_3566_1_115
Type: TC
Location: 103927 - 104766 (-)
Type: TC
Location: 103927 - 104766 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-492
Species
CAG-492 sp900557195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3566_1_115 | vegan > omnivore | 1.48039 | 0.03728 |