Cluster: HRGMv2_3565_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3565
- CGC Family ID: CGCFAM_00084
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3565_18 | HRGMv2_3565_18_18 | 17194 | 18096 | - | GT28 |
| TC | HRGMv2_3565_18 | HRGMv2_3565_18_19 | 18212 | 18712 | - | 2.A.103.1.3 |
| TC | HRGMv2_3565_18 | HRGMv2_3565_18_20 | 18746 | 19372 | - | 2.A.103.1.3 |
| TC | HRGMv2_3565_18 | HRGMv2_3565_18_21 | 19401 | 20378 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_3565_18_18
Type: CAZyme
Location: 17194 - 18096 (-)
Type: CAZyme
Location: 17194 - 18096 (-)
Gene ID: HRGMv2_3565_18_19
Type: TC
Location: 18212 - 18712 (-)
Type: TC
Location: 18212 - 18712 (-)
Gene ID: HRGMv2_3565_18_20
Type: TC
Location: 18746 - 19372 (-)
Type: TC
Location: 18746 - 19372 (-)
Gene ID: HRGMv2_3565_18_21
Type: TC
Location: 19401 - 20378 (-)
Type: TC
Location: 19401 - 20378 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-492
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3565_18_21 | vegan > omnivore | 1.26303 | 0.03101 |