Cluster: HRGMv2_3565_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3565
- CGC Family ID: CGCFAM_04091
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3565_13 | HRGMv2_3565_13_11 | 9697 | 11553 | - | GT35 |
| CAZyme | HRGMv2_3565_13 | HRGMv2_3565_13_12 | 11841 | 12557 | + | GT51 |
| NULL(UNKNOWN) | HRGMv2_3565_13 | HRGMv2_3565_13_13 | 13169 | 13999 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3565_13 | HRGMv2_3565_13_14 | 14130 | 15995 | - | 4.C.1.1.4 |
| NULL(UNKNOWN) | HRGMv2_3565_13 | HRGMv2_3565_13_15 | 16317 | 16478 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | HRGMv2_3565_13 | HRGMv2_3565_13_16 | 16456 | 16884 | - | TetR_N |
| TC | HRGMv2_3565_13 | HRGMv2_3565_13_17 | 17118 | 18122 | - | 9.B.157.1.1 |
Gene ID: HRGMv2_3565_13_11
Type: CAZyme
Location: 9697 - 11553 (-)
Type: CAZyme
Location: 9697 - 11553 (-)
Gene ID: HRGMv2_3565_13_12
Type: CAZyme
Location: 11841 - 12557 (+)
Type: CAZyme
Location: 11841 - 12557 (+)
Gene ID: HRGMv2_3565_13_13
Type:
Location: 13169 - 13999 (-)
Type:
Location: 13169 - 13999 (-)
Gene ID: HRGMv2_3565_13_14
Type: TC
Location: 14130 - 15995 (-)
Type: TC
Location: 14130 - 15995 (-)
Gene ID: HRGMv2_3565_13_15
Type:
Location: 16317 - 16478 (-)
Type:
Location: 16317 - 16478 (-)
Gene ID: HRGMv2_3565_13_16
Type: STP
Location: 16456 - 16884 (-)
Type: STP
Location: 16456 - 16884 (-)
Gene ID: HRGMv2_3565_13_17
Type: TC
Location: 17118 - 18122 (-)
Type: TC
Location: 17118 - 18122 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-492
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.