Cluster: HRGMv2_3565_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3565
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3565_3 | HRGMv2_3565_3_19 | 12323 | 13816 | - | 9.B.106.2.2 |
| pfam | HRGMv2_3565_3 | HRGMv2_3565_3_20 | 13897 | 14622 | - | PP2C | PP2C_2 |
| pfam | HRGMv2_3565_3 | HRGMv2_3565_3_21 | 14632 | 15654 | - | Radical_SAM | RlmN_N |
| CAZyme | HRGMv2_3565_3 | HRGMv2_3565_3_22 | 16010 | 16801 | + | CE4 |
Gene ID: HRGMv2_3565_3_19
Type: TC
Location: 12323 - 13816 (-)
Type: TC
Location: 12323 - 13816 (-)
Gene ID: HRGMv2_3565_3_20
Type: pfam
Location: 13897 - 14622 (-)
Type: pfam
Location: 13897 - 14622 (-)
Gene ID: HRGMv2_3565_3_21
Type: pfam
Location: 14632 - 15654 (-)
Type: pfam
Location: 14632 - 15654 (-)
Gene ID: HRGMv2_3565_3_22
Type: CAZyme
Location: 16010 - 16801 (+)
Type: CAZyme
Location: 16010 - 16801 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-492
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3565_3_21 | vegan > omnivore | 1.01304 | 0.03101 |