Cluster: HRGMv2_3561_CGC2
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3561
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3561_1 | HRGMv2_3561_1_40 | 36434 | 36820 | - | 9.B.70.1.1 |
| pfam | HRGMv2_3561_1 | HRGMv2_3561_1_41 | 36850 | 37044 | - | SpoIIIAC |
| pfam | HRGMv2_3561_1 | HRGMv2_3561_1_42 | 37060 | 37569 | - | Spore_III_AB |
| TC | HRGMv2_3561_1 | HRGMv2_3561_1_43 | 37626 | 38489 | - | 9.B.70.1.1 |
| peptidase | HRGMv2_3561_1 | HRGMv2_3561_1_44 | 38595 | 39314 | - | M20.UNW |
| NULL(UNKNOWN) | HRGMv2_3561_1 | HRGMv2_3561_1_45 | 39461 | 40252 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3561_1 | HRGMv2_3561_1_46 | 40246 | 40941 | - | 3.A.1.132.6 |
| TF | HRGMv2_3561_1 | HRGMv2_3561_1_47 | 40957 | 41313 | - | GntR |
| TC | HRGMv2_3561_1 | HRGMv2_3561_1_48 | 41513 | 43636 | - | 3.A.1.135.6 |
| TC | HRGMv2_3561_1 | HRGMv2_3561_1_49 | 43629 | 45392 | - | 3.A.1.135.6 |
| TF | HRGMv2_3561_1 | HRGMv2_3561_1_50 | 45386 | 45850 | - | MarR |
| pfam | HRGMv2_3561_1 | HRGMv2_3561_1_51 | 46117 | 47616 | - | tRNA-synt_2 | tRNA_anti-codon |
| TC | HRGMv2_3561_1 | HRGMv2_3561_1_52 | 47634 | 49448 | - | 3.A.16.1.1 |
| pfam | HRGMv2_3561_1 | HRGMv2_3561_1_53 | 49480 | 50535 | - | DUF1189 |
| pfam | HRGMv2_3561_1 | HRGMv2_3561_1_54 | 50618 | 51997 | - | tRNA-synt_1e | tRNA-synt_1g | CysS_C |
| CAZyme | HRGMv2_3561_1 | HRGMv2_3561_1_55 | 52016 | 54622 | - | GT51 |
| pfam | HRGMv2_3561_1 | HRGMv2_3561_1_56 | 54770 | 55312 | + | DUF1980_C |
| TC | HRGMv2_3561_1 | HRGMv2_3561_1_57 | 55344 | 56441 | - | 2.A.86.1.9 |
Gene ID: HRGMv2_3561_1_40
Type: TC
Location: 36434 - 36820 (-)
Type: TC
Location: 36434 - 36820 (-)
Gene ID: HRGMv2_3561_1_41
Type: pfam
Location: 36850 - 37044 (-)
Type: pfam
Location: 36850 - 37044 (-)
Gene ID: HRGMv2_3561_1_42
Type: pfam
Location: 37060 - 37569 (-)
Type: pfam
Location: 37060 - 37569 (-)
Gene ID: HRGMv2_3561_1_43
Type: TC
Location: 37626 - 38489 (-)
Type: TC
Location: 37626 - 38489 (-)
Gene ID: HRGMv2_3561_1_44
Type: peptidase
Location: 38595 - 39314 (-)
Type: peptidase
Location: 38595 - 39314 (-)
Gene ID: HRGMv2_3561_1_45
Type:
Location: 39461 - 40252 (-)
Type:
Location: 39461 - 40252 (-)
Gene ID: HRGMv2_3561_1_46
Type: TC
Location: 40246 - 40941 (-)
Type: TC
Location: 40246 - 40941 (-)
Gene ID: HRGMv2_3561_1_47
Type: TF
Location: 40957 - 41313 (-)
Type: TF
Location: 40957 - 41313 (-)
Gene ID: HRGMv2_3561_1_48
Type: TC
Location: 41513 - 43636 (-)
Type: TC
Location: 41513 - 43636 (-)
Gene ID: HRGMv2_3561_1_49
Type: TC
Location: 43629 - 45392 (-)
Type: TC
Location: 43629 - 45392 (-)
Gene ID: HRGMv2_3561_1_50
Type: TF
Location: 45386 - 45850 (-)
Type: TF
Location: 45386 - 45850 (-)
Gene ID: HRGMv2_3561_1_51
Type: pfam
Location: 46117 - 47616 (-)
Type: pfam
Location: 46117 - 47616 (-)
Gene ID: HRGMv2_3561_1_52
Type: TC
Location: 47634 - 49448 (-)
Type: TC
Location: 47634 - 49448 (-)
Gene ID: HRGMv2_3561_1_53
Type: pfam
Location: 49480 - 50535 (-)
Type: pfam
Location: 49480 - 50535 (-)
Gene ID: HRGMv2_3561_1_54
Type: pfam
Location: 50618 - 51997 (-)
Type: pfam
Location: 50618 - 51997 (-)
Gene ID: HRGMv2_3561_1_55
Type: CAZyme
Location: 52016 - 54622 (-)
Type: CAZyme
Location: 52016 - 54622 (-)
Gene ID: HRGMv2_3561_1_56
Type: pfam
Location: 54770 - 55312 (+)
Type: pfam
Location: 54770 - 55312 (+)
Gene ID: HRGMv2_3561_1_57
Type: TC
Location: 55344 - 56441 (-)
Type: TC
Location: 55344 - 56441 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
HGM13634
Species
HGM13634 sp900770385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.