Cluster: HRGMv2_3558_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3558
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3558_5 | HRGMv2_3558_5_55 | 59231 | 60106 | + | 3.A.1.126.1 |
| pfam | HRGMv2_3558_5 | HRGMv2_3558_5_56 | 60153 | 60944 | + | ABC2_membrane_2 | ABC2_membrane_4 | ABC2_membrane_5 |
| peptidase | HRGMv2_3558_5 | HRGMv2_3558_5_57 | 60992 | 62005 | + | S66.UNW |
| TC | HRGMv2_3558_5 | HRGMv2_3558_5_58 | 62085 | 62756 | + | 9.B.116.3.1 |
| pfam | HRGMv2_3558_5 | HRGMv2_3558_5_59 | 63179 | 63676 | + | SpoU_methylase |
| pfam | HRGMv2_3558_5 | HRGMv2_3558_5_60 | 63774 | 65003 | + | tRNA-synt_1b | S4 | SYY_C-terminal |
| CAZyme | HRGMv2_3558_5 | HRGMv2_3558_5_61 | 65153 | 67033 | + | GH13_39 |
Gene ID: HRGMv2_3558_5_55
Type: TC
Location: 59231 - 60106 (+)
Type: TC
Location: 59231 - 60106 (+)
Gene ID: HRGMv2_3558_5_56
Type: pfam
Location: 60153 - 60944 (+)
Type: pfam
Location: 60153 - 60944 (+)
Gene ID: HRGMv2_3558_5_57
Type: peptidase
Location: 60992 - 62005 (+)
Type: peptidase
Location: 60992 - 62005 (+)
Gene ID: HRGMv2_3558_5_58
Type: TC
Location: 62085 - 62756 (+)
Type: TC
Location: 62085 - 62756 (+)
Gene ID: HRGMv2_3558_5_59
Type: pfam
Location: 63179 - 63676 (+)
Type: pfam
Location: 63179 - 63676 (+)
Gene ID: HRGMv2_3558_5_60
Type: pfam
Location: 63774 - 65003 (+)
Type: pfam
Location: 63774 - 65003 (+)
Gene ID: HRGMv2_3558_5_61
Type: CAZyme
Location: 65153 - 67033 (+)
Type: CAZyme
Location: 65153 - 67033 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-492
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.