Cluster: HRGMv2_3558_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3558
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3558_3 | HRGMv2_3558_3_131 | 134401 | 134904 | + | 9.B.98.2.1 |
| pfam | HRGMv2_3558_3 | HRGMv2_3558_3_132 | 135176 | 136057 | + | Phage_integrase | Phage_int_SAM_1 | Phage_int_SAM_5 | Phage_int_SAM_4 |
| TC | HRGMv2_3558_3 | HRGMv2_3558_3_133 | 136762 | 139497 | + | 3.A.3.2.21 |
| TC | HRGMv2_3558_3 | HRGMv2_3558_3_134 | 139808 | 140482 | - | 1.C.113.1.1 |
| CAZyme | HRGMv2_3558_3 | HRGMv2_3558_3_135 | 140745 | 141500 | - | GT2 |
Gene ID: HRGMv2_3558_3_131
Type: TC
Location: 134401 - 134904 (+)
Type: TC
Location: 134401 - 134904 (+)
Gene ID: HRGMv2_3558_3_132
Type: pfam
Location: 135176 - 136057 (+)
Type: pfam
Location: 135176 - 136057 (+)
Gene ID: HRGMv2_3558_3_133
Type: TC
Location: 136762 - 139497 (+)
Type: TC
Location: 136762 - 139497 (+)
Gene ID: HRGMv2_3558_3_134
Type: TC
Location: 139808 - 140482 (-)
Type: TC
Location: 139808 - 140482 (-)
Gene ID: HRGMv2_3558_3_135
Type: CAZyme
Location: 140745 - 141500 (-)
Type: CAZyme
Location: 140745 - 141500 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-492
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3558_3_132 | vegan > omnivore | 1.28937 | 0.01684 |