Cluster: HRGMv2_3558_CGC5
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 6
- Substrate:
- Genome ID: HRGMv2_3558
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3558_2 | HRGMv2_3558_2_24 | 24560 | 25294 | + | 3.A.1.103.1 |
| CAZyme | HRGMv2_3558_2 | HRGMv2_3558_2_25 | 25310 | 27334 | + | GT2 |
| NULL(UNKNOWN) | HRGMv2_3558_2 | HRGMv2_3558_2_26 | 27366 | 28760 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3558_2 | HRGMv2_3558_2_27 | 28775 | 30061 | + | GT4 |
| CAZyme | HRGMv2_3558_2 | HRGMv2_3558_2_28 | 30080 | 32554 | + | GT4 |
| CAZyme | HRGMv2_3558_2 | HRGMv2_3558_2_29 | 32589 | 33344 | + | GT26 |
| pfam | HRGMv2_3558_2 | HRGMv2_3558_2_30 | 33326 | 34438 | + | Epimerase_2 |
| TC | HRGMv2_3558_2 | HRGMv2_3558_2_31 | 34461 | 35561 | + | 9.B.146.1.1 |
| STP | HRGMv2_3558_2 | HRGMv2_3558_2_32 | 35659 | 36660 | + | AAA |
| NULL(UNKNOWN) | HRGMv2_3558_2 | HRGMv2_3558_2_33 | 36839 | 37198 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3558_2 | HRGMv2_3558_2_34 | 37326 | 38996 | - | GH57 |
| pfam | HRGMv2_3558_2 | HRGMv2_3558_2_35 | 39110 | 40180 | - | DUF4912 |
| CAZyme | HRGMv2_3558_2 | HRGMv2_3558_2_36 | 40410 | 41702 | + | GT4 |
Gene ID: HRGMv2_3558_2_24
Type: TC
Location: 24560 - 25294 (+)
Type: TC
Location: 24560 - 25294 (+)
Gene ID: HRGMv2_3558_2_25
Type: CAZyme
Location: 25310 - 27334 (+)
Type: CAZyme
Location: 25310 - 27334 (+)
Gene ID: HRGMv2_3558_2_26
Type:
Location: 27366 - 28760 (+)
Type:
Location: 27366 - 28760 (+)
Gene ID: HRGMv2_3558_2_27
Type: CAZyme
Location: 28775 - 30061 (+)
Type: CAZyme
Location: 28775 - 30061 (+)
Gene ID: HRGMv2_3558_2_28
Type: CAZyme
Location: 30080 - 32554 (+)
Type: CAZyme
Location: 30080 - 32554 (+)
Gene ID: HRGMv2_3558_2_29
Type: CAZyme
Location: 32589 - 33344 (+)
Type: CAZyme
Location: 32589 - 33344 (+)
Gene ID: HRGMv2_3558_2_30
Type: pfam
Location: 33326 - 34438 (+)
Type: pfam
Location: 33326 - 34438 (+)
Gene ID: HRGMv2_3558_2_31
Type: TC
Location: 34461 - 35561 (+)
Type: TC
Location: 34461 - 35561 (+)
Gene ID: HRGMv2_3558_2_32
Type: STP
Location: 35659 - 36660 (+)
Type: STP
Location: 35659 - 36660 (+)
Gene ID: HRGMv2_3558_2_33
Type:
Location: 36839 - 37198 (+)
Type:
Location: 36839 - 37198 (+)
Gene ID: HRGMv2_3558_2_34
Type: CAZyme
Location: 37326 - 38996 (-)
Type: CAZyme
Location: 37326 - 38996 (-)
Gene ID: HRGMv2_3558_2_35
Type: pfam
Location: 39110 - 40180 (-)
Type: pfam
Location: 39110 - 40180 (-)
Gene ID: HRGMv2_3558_2_36
Type: CAZyme
Location: 40410 - 41702 (+)
Type: CAZyme
Location: 40410 - 41702 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-492
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.