Cluster: HRGMv2_3558_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3558
- CGC Family ID: CGCFAM_10391
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3558_1 | HRGMv2_3558_1_21 | 19057 | 27039 | - | GH94 | GT84 |
| NULL(UNKNOWN) | HRGMv2_3558_1 | HRGMv2_3558_1_22 | 27274 | 28419 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3558_1 | HRGMv2_3558_1_23 | 28958 | 30973 | - | 3.A.3.2.21 |
| TC | HRGMv2_3558_1 | HRGMv2_3558_1_24 | 30963 | 31625 | - | 3.A.3.2.21 |
| NULL(UNKNOWN) | HRGMv2_3558_1 | HRGMv2_3558_1_25 | 31686 | 31985 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3558_1 | HRGMv2_3558_1_26 | 32178 | 33632 | - | ABC2_membrane_2 | ABC2_membrane_4 |
| TC | HRGMv2_3558_1 | HRGMv2_3558_1_27 | 33625 | 34536 | - | 3.A.1.131.1 |
Gene ID: HRGMv2_3558_1_21
Type: CAZyme
Location: 19057 - 27039 (-)
Type: CAZyme
Location: 19057 - 27039 (-)
Gene ID: HRGMv2_3558_1_22
Type:
Location: 27274 - 28419 (-)
Type:
Location: 27274 - 28419 (-)
Gene ID: HRGMv2_3558_1_23
Type: TC
Location: 28958 - 30973 (-)
Type: TC
Location: 28958 - 30973 (-)
Gene ID: HRGMv2_3558_1_24
Type: TC
Location: 30963 - 31625 (-)
Type: TC
Location: 30963 - 31625 (-)
Gene ID: HRGMv2_3558_1_25
Type:
Location: 31686 - 31985 (-)
Type:
Location: 31686 - 31985 (-)
Gene ID: HRGMv2_3558_1_26
Type: pfam
Location: 32178 - 33632 (-)
Type: pfam
Location: 32178 - 33632 (-)
Gene ID: HRGMv2_3558_1_27
Type: TC
Location: 33625 - 34536 (-)
Type: TC
Location: 33625 - 34536 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-492
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.