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Cluster: HRGMv2_3557_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3557_3 HRGMv2_3557_3_112 113457 114749 - GT4
pfam HRGMv2_3557_3 HRGMv2_3557_3_113 115163 116194 + DUF4912
CAZyme HRGMv2_3557_3 HRGMv2_3557_3_114 116479 118161 + GH57
NULL(UNKNOWN) HRGMv2_3557_3 HRGMv2_3557_3_115 118365 118721 + NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_3557_3 HRGMv2_3557_3_116 118781 119794 - AAA
TC HRGMv2_3557_3 HRGMv2_3557_3_117 119836 120957 - 9.B.146.1.1
pfam HRGMv2_3557_3 HRGMv2_3557_3_118 120987 122774 - DUF6020
CAZyme HRGMv2_3557_3 HRGMv2_3557_3_119 122778 123506 - GT32
CAZyme HRGMv2_3557_3 HRGMv2_3557_3_120 123509 124624 - GT2
TC HRGMv2_3557_3 HRGMv2_3557_3_121 124650 125423 - 3.A.1.103.4
TC HRGMv2_3557_3 HRGMv2_3557_3_122 125455 126990 - 3.A.1.103.4
pfam HRGMv2_3557_3 HRGMv2_3557_3_123 126953 127105 - Glycos_transf_2
CAZyme HRGMv2_3557_3 HRGMv2_3557_3_124 127106 128209 - GT4
pfam HRGMv2_3557_3 HRGMv2_3557_3_125 128214 129638 - O-antigen_lig
NULL(UNKNOWN) HRGMv2_3557_3 HRGMv2_3557_3_126 129686 130411 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3557_3 HRGMv2_3557_3_127 130398 130649 - GT2
CAZyme HRGMv2_3557_3 HRGMv2_3557_3_128 130718 131659 - GT2
CAZyme HRGMv2_3557_3 HRGMv2_3557_3_129 131665 132771 - GT4
pfam HRGMv2_3557_3 HRGMv2_3557_3_130 132887 133591 - Rib_5-P_isom_A
CAZyme HRGMv2_3557_3 HRGMv2_3557_3_131 133804 134736 - GT2
Gene ID: HRGMv2_3557_3_112
Type: CAZyme
Location: 113457 - 114749 (-)
Gene ID: HRGMv2_3557_3_113
Type: pfam
Location: 115163 - 116194 (+)
Gene ID: HRGMv2_3557_3_114
Type: CAZyme
Location: 116479 - 118161 (+)
Gene ID: HRGMv2_3557_3_115
Type:
Location: 118365 - 118721 (+)
Gene ID: HRGMv2_3557_3_116
Type: STP
Location: 118781 - 119794 (-)
Gene ID: HRGMv2_3557_3_117
Type: TC
Location: 119836 - 120957 (-)
Gene ID: HRGMv2_3557_3_118
Type: pfam
Location: 120987 - 122774 (-)
Gene ID: HRGMv2_3557_3_119
Type: CAZyme
Location: 122778 - 123506 (-)
Gene ID: HRGMv2_3557_3_120
Type: CAZyme
Location: 123509 - 124624 (-)
Gene ID: HRGMv2_3557_3_121
Type: TC
Location: 124650 - 125423 (-)
Gene ID: HRGMv2_3557_3_122
Type: TC
Location: 125455 - 126990 (-)
Gene ID: HRGMv2_3557_3_123
Type: pfam
Location: 126953 - 127105 (-)
Gene ID: HRGMv2_3557_3_124
Type: CAZyme
Location: 127106 - 128209 (-)
Gene ID: HRGMv2_3557_3_125
Type: pfam
Location: 128214 - 129638 (-)
Gene ID: HRGMv2_3557_3_126
Type:
Location: 129686 - 130411 (-)
Gene ID: HRGMv2_3557_3_127
Type: CAZyme
Location: 130398 - 130649 (-)
Gene ID: HRGMv2_3557_3_128
Type: CAZyme
Location: 130718 - 131659 (-)
Gene ID: HRGMv2_3557_3_129
Type: CAZyme
Location: 131665 - 132771 (-)
Gene ID: HRGMv2_3557_3_130
Type: pfam
Location: 132887 - 133591 (-)
Gene ID: HRGMv2_3557_3_131
Type: CAZyme
Location: 133804 - 134736 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
TANB77
→
Family
CAG-508
→
Genus
CAG-492
→
Species
CAG-492 sp900557045

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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