Cluster: HRGMv2_3557_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3557
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3557_1 | HRGMv2_3557_1_167 | 154481 | 155437 | - | GT2 |
| pfam | HRGMv2_3557_1 | HRGMv2_3557_1_168 | 155543 | 156406 | + | PseudoU_synth_2 |
| pfam | HRGMv2_3557_1 | HRGMv2_3557_1_169 | 156509 | 157351 | + | YtxC |
| TC | HRGMv2_3557_1 | HRGMv2_3557_1_170 | 157603 | 158511 | + | 3.A.1.131.3 |
Gene ID: HRGMv2_3557_1_167
Type: CAZyme
Location: 154481 - 155437 (-)
Type: CAZyme
Location: 154481 - 155437 (-)
Gene ID: HRGMv2_3557_1_168
Type: pfam
Location: 155543 - 156406 (+)
Type: pfam
Location: 155543 - 156406 (+)
Gene ID: HRGMv2_3557_1_169
Type: pfam
Location: 156509 - 157351 (+)
Type: pfam
Location: 156509 - 157351 (+)
Gene ID: HRGMv2_3557_1_170
Type: TC
Location: 157603 - 158511 (+)
Type: TC
Location: 157603 - 158511 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-492
Species
CAG-492 sp900557045
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.