Cluster: HRGMv2_3557_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3557
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3557_14 | HRGMv2_3557_14_3 | 1974 | 3854 | - | GH13_39 |
| pfam | HRGMv2_3557_14 | HRGMv2_3557_14_4 | 4070 | 5293 | - | tRNA-synt_1b | S4 | SYY_C-terminal |
| pfam | HRGMv2_3557_14 | HRGMv2_3557_14_5 | 5386 | 5883 | - | SpoU_methylase |
| TC | HRGMv2_3557_14 | HRGMv2_3557_14_6 | 6265 | 6936 | - | 9.B.116.3.1 |
| pfam | HRGMv2_3557_14 | HRGMv2_3557_14_7 | 7168 | 7962 | - | ABC2_membrane_6 |
| pfam | HRGMv2_3557_14 | HRGMv2_3557_14_8 | 7965 | 8756 | - | ABC2_membrane_6 |
| TC | HRGMv2_3557_14 | HRGMv2_3557_14_9 | 8768 | 9739 | - | 3.A.1.141.2 |
Gene ID: HRGMv2_3557_14_3
Type: CAZyme
Location: 1974 - 3854 (-)
Type: CAZyme
Location: 1974 - 3854 (-)
Gene ID: HRGMv2_3557_14_4
Type: pfam
Location: 4070 - 5293 (-)
Type: pfam
Location: 4070 - 5293 (-)
Gene ID: HRGMv2_3557_14_5
Type: pfam
Location: 5386 - 5883 (-)
Type: pfam
Location: 5386 - 5883 (-)
Gene ID: HRGMv2_3557_14_6
Type: TC
Location: 6265 - 6936 (-)
Type: TC
Location: 6265 - 6936 (-)
Gene ID: HRGMv2_3557_14_7
Type: pfam
Location: 7168 - 7962 (-)
Type: pfam
Location: 7168 - 7962 (-)
Gene ID: HRGMv2_3557_14_8
Type: pfam
Location: 7965 - 8756 (-)
Type: pfam
Location: 7965 - 8756 (-)
Gene ID: HRGMv2_3557_14_9
Type: TC
Location: 8768 - 9739 (-)
Type: TC
Location: 8768 - 9739 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-492
Species
CAG-492 sp900557045
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.