Cluster: HRGMv2_3557_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3557
- CGC Family ID: CGCFAM_10391
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3557_13 | HRGMv2_3557_13_10 | 12011 | 20116 | - | GH94 | GT84 |
| TC | HRGMv2_3557_13 | HRGMv2_3557_13_11 | 20217 | 22274 | - | 3.A.3.2.21 |
| TC | HRGMv2_3557_13 | HRGMv2_3557_13_12 | 22264 | 22926 | - | 3.A.3.2.21 |
| pfam | HRGMv2_3557_13 | HRGMv2_3557_13_13 | 23404 | 24279 | - | ABC2_membrane_2 | ABC2_membrane_4 |
| NULL(UNKNOWN) | HRGMv2_3557_13 | HRGMv2_3557_13_14 | 24332 | 24904 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3557_13 | HRGMv2_3557_13_15 | 24897 | 25808 | - | 3.A.1.124.5 |
Gene ID: HRGMv2_3557_13_10
Type: CAZyme
Location: 12011 - 20116 (-)
Type: CAZyme
Location: 12011 - 20116 (-)
Gene ID: HRGMv2_3557_13_11
Type: TC
Location: 20217 - 22274 (-)
Type: TC
Location: 20217 - 22274 (-)
Gene ID: HRGMv2_3557_13_12
Type: TC
Location: 22264 - 22926 (-)
Type: TC
Location: 22264 - 22926 (-)
Gene ID: HRGMv2_3557_13_13
Type: pfam
Location: 23404 - 24279 (-)
Type: pfam
Location: 23404 - 24279 (-)
Gene ID: HRGMv2_3557_13_14
Type:
Location: 24332 - 24904 (-)
Type:
Location: 24332 - 24904 (-)
Gene ID: HRGMv2_3557_13_15
Type: TC
Location: 24897 - 25808 (-)
Type: TC
Location: 24897 - 25808 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-492
Species
CAG-492 sp900557045
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.