Cluster: HRGMv2_3555_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3555
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3555_27 | HRGMv2_3555_27_10 | 13236 | 14150 | + | CE4 |
| pfam | HRGMv2_3555_27 | HRGMv2_3555_27_11 | 14288 | 15064 | - | ABC2_membrane_6 |
| pfam | HRGMv2_3555_27 | HRGMv2_3555_27_12 | 15200 | 16114 | - | ABC2_membrane_3 |
| TC | HRGMv2_3555_27 | HRGMv2_3555_27_13 | 16219 | 17190 | - | 3.A.1.141.2 |
Gene ID: HRGMv2_3555_27_10
Type: CAZyme
Location: 13236 - 14150 (+)
Type: CAZyme
Location: 13236 - 14150 (+)
Gene ID: HRGMv2_3555_27_11
Type: pfam
Location: 14288 - 15064 (-)
Type: pfam
Location: 14288 - 15064 (-)
Gene ID: HRGMv2_3555_27_12
Type: pfam
Location: 15200 - 16114 (-)
Type: pfam
Location: 15200 - 16114 (-)
Gene ID: HRGMv2_3555_27_13
Type: TC
Location: 16219 - 17190 (-)
Type: TC
Location: 16219 - 17190 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-245
Species
CAG-245 sp900552135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.