Cluster: HRGMv2_3555_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3555
- CGC Family ID: CGCFAM_01066
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3555_13 | HRGMv2_3555_13_1 | 101 | 790 | + | 3.A.11.1.3 |
| CAZyme | HRGMv2_3555_13 | HRGMv2_3555_13_2 | 909 | 3572 | + | GT51 |
| pfam | HRGMv2_3555_13 | HRGMv2_3555_13_3 | 3604 | 5016 | + | tRNA-synt_1e | tRNA-synt_1g | CysS_C |
| pfam | HRGMv2_3555_13 | HRGMv2_3555_13_4 | 5048 | 6142 | + | DUF1189 |
| TC | HRGMv2_3555_13 | HRGMv2_3555_13_5 | 6241 | 8094 | + | 3.A.16.1.1 |
Gene ID: HRGMv2_3555_13_1
Type: TC
Location: 101 - 790 (+)
Type: TC
Location: 101 - 790 (+)
Gene ID: HRGMv2_3555_13_2
Type: CAZyme
Location: 909 - 3572 (+)
Type: CAZyme
Location: 909 - 3572 (+)
Gene ID: HRGMv2_3555_13_3
Type: pfam
Location: 3604 - 5016 (+)
Type: pfam
Location: 3604 - 5016 (+)
Gene ID: HRGMv2_3555_13_4
Type: pfam
Location: 5048 - 6142 (+)
Type: pfam
Location: 5048 - 6142 (+)
Gene ID: HRGMv2_3555_13_5
Type: TC
Location: 6241 - 8094 (+)
Type: TC
Location: 6241 - 8094 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-245
Species
CAG-245 sp900552135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.