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Cluster: HRGMv2_3551_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3551_6 HRGMv2_3551_6_4 1770 3245 - 3.A.11.3.1
pfam HRGMv2_3551_6 HRGMv2_3551_6_5 3202 4038 - PriA_3primeBD
TC HRGMv2_3551_6 HRGMv2_3551_6_6 4310 5083 - 3.A.1.103.1
TC HRGMv2_3551_6 HRGMv2_3551_6_7 5084 5827 - 3.A.1.103.4
CAZyme HRGMv2_3551_6 HRGMv2_3551_6_8 5912 6808 - GT2
CAZyme HRGMv2_3551_6 HRGMv2_3551_6_9 6961 8130 - GT4
pfam HRGMv2_3551_6 HRGMv2_3551_6_10 8138 9649 - O-antigen_lig
pfam HRGMv2_3551_6 HRGMv2_3551_6_11 9710 10378 - Cadherin-like
CAZyme HRGMv2_3551_6 HRGMv2_3551_6_12 10444 13209 - CBM13 | CBM13 | CBM13
CAZyme HRGMv2_3551_6 HRGMv2_3551_6_13 13399 14337 - GT2
pfam HRGMv2_3551_6 HRGMv2_3551_6_14 14303 16093 - DUF6020
CAZyme HRGMv2_3551_6 HRGMv2_3551_6_15 16245 17201 - GT2
CAZyme HRGMv2_3551_6 HRGMv2_3551_6_16 17331 18275 - GT2
CAZyme HRGMv2_3551_6 HRGMv2_3551_6_17 18406 20211 - GT32
CAZyme HRGMv2_3551_6 HRGMv2_3551_6_18 20226 21308 - GT2
CAZyme HRGMv2_3551_6 HRGMv2_3551_6_19 21326 22426 - GT4
pfam HRGMv2_3551_6 HRGMv2_3551_6_20 22535 23233 - Rib_5-P_isom_A
sulfatase HRGMv2_3551_6 HRGMv2_3551_6_21 23302 23919 - S1_7
TC HRGMv2_3551_6 HRGMv2_3551_6_22 24084 24992 - 9.B.70.1.1
pfam HRGMv2_3551_6 HRGMv2_3551_6_23 25183 25926 - CpsB_CapC
TC HRGMv2_3551_6 HRGMv2_3551_6_24 25929 26819 - 8.A.3.2.1
Gene ID: HRGMv2_3551_6_4
Type: TC
Location: 1770 - 3245 (-)
Gene ID: HRGMv2_3551_6_5
Type: pfam
Location: 3202 - 4038 (-)
Gene ID: HRGMv2_3551_6_6
Type: TC
Location: 4310 - 5083 (-)
Gene ID: HRGMv2_3551_6_7
Type: TC
Location: 5084 - 5827 (-)
Gene ID: HRGMv2_3551_6_8
Type: CAZyme
Location: 5912 - 6808 (-)
Gene ID: HRGMv2_3551_6_9
Type: CAZyme
Location: 6961 - 8130 (-)
Gene ID: HRGMv2_3551_6_10
Type: pfam
Location: 8138 - 9649 (-)
Gene ID: HRGMv2_3551_6_11
Type: pfam
Location: 9710 - 10378 (-)
Gene ID: HRGMv2_3551_6_12
Type: CAZyme
Location: 10444 - 13209 (-)
Gene ID: HRGMv2_3551_6_13
Type: CAZyme
Location: 13399 - 14337 (-)
Gene ID: HRGMv2_3551_6_14
Type: pfam
Location: 14303 - 16093 (-)
Gene ID: HRGMv2_3551_6_15
Type: CAZyme
Location: 16245 - 17201 (-)
Gene ID: HRGMv2_3551_6_16
Type: CAZyme
Location: 17331 - 18275 (-)
Gene ID: HRGMv2_3551_6_17
Type: CAZyme
Location: 18406 - 20211 (-)
Gene ID: HRGMv2_3551_6_18
Type: CAZyme
Location: 20226 - 21308 (-)
Gene ID: HRGMv2_3551_6_19
Type: CAZyme
Location: 21326 - 22426 (-)
Gene ID: HRGMv2_3551_6_20
Type: pfam
Location: 22535 - 23233 (-)
Gene ID: HRGMv2_3551_6_21
Type: sulfatase
Location: 23302 - 23919 (-)
Gene ID: HRGMv2_3551_6_22
Type: TC
Location: 24084 - 24992 (-)
Gene ID: HRGMv2_3551_6_23
Type: pfam
Location: 25183 - 25926 (-)
Gene ID: HRGMv2_3551_6_24
Type: TC
Location: 25929 - 26819 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
TANB77
→
Family
CAG-508
→
Genus
CAG-245
→
Species
CAG-245 sp934122035

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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