Cluster: HRGMv2_3551_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3551
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3551_4 | HRGMv2_3551_4_9 | 9884 | 10873 | + | 9.B.146.1.6 |
| TC | HRGMv2_3551_4 | HRGMv2_3551_4_10 | 10901 | 12070 | + | 2.A.103.1.3 |
| CAZyme | HRGMv2_3551_4 | HRGMv2_3551_4_11 | 12166 | 13272 | + | GT28 |
| pfam | HRGMv2_3551_4 | HRGMv2_3551_4_12 | 13489 | 13830 | + | DUF6514 |
| TC | HRGMv2_3551_4 | HRGMv2_3551_4_13 | 13926 | 16022 | + | 3.A.7.7.1 |
Gene ID: HRGMv2_3551_4_9
Type: TC
Location: 9884 - 10873 (+)
Type: TC
Location: 9884 - 10873 (+)
Gene ID: HRGMv2_3551_4_10
Type: TC
Location: 10901 - 12070 (+)
Type: TC
Location: 10901 - 12070 (+)
Gene ID: HRGMv2_3551_4_11
Type: CAZyme
Location: 12166 - 13272 (+)
Type: CAZyme
Location: 12166 - 13272 (+)
Gene ID: HRGMv2_3551_4_12
Type: pfam
Location: 13489 - 13830 (+)
Type: pfam
Location: 13489 - 13830 (+)
Gene ID: HRGMv2_3551_4_13
Type: TC
Location: 13926 - 16022 (+)
Type: TC
Location: 13926 - 16022 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-245
Species
CAG-245 sp934122035
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3551_4_13 | vegetarian > omnivore | 1.91890 | 0.02840 |