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Cluster: HRGMv2_3547_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3547_1 HRGMv2_3547_1_578 600265 601503 - 9.B.70.1.1
TC HRGMv2_3547_1 HRGMv2_3547_1_579 601507 601890 - 9.B.70.1.1
pfam HRGMv2_3547_1 HRGMv2_3547_1_580 601899 602093 - SpoIIIAC
pfam HRGMv2_3547_1 HRGMv2_3547_1_581 602110 602628 - Spore_III_AB
TC HRGMv2_3547_1 HRGMv2_3547_1_582 602625 603539 - 9.B.70.1.1
pfam HRGMv2_3547_1 HRGMv2_3547_1_583 603874 607155 - SNF2-rel_dom | DEAD | Helicase_C | SWIM | ResIII | SNF2_assoc
TC HRGMv2_3547_1 HRGMv2_3547_1_584 607273 608280 - 9.A.40.2.1
CAZyme HRGMv2_3547_1 HRGMv2_3547_1_585 608353 609990 - GH18
Gene ID: HRGMv2_3547_1_578
Type: TC
Location: 600265 - 601503 (-)
Gene ID: HRGMv2_3547_1_579
Type: TC
Location: 601507 - 601890 (-)
Gene ID: HRGMv2_3547_1_580
Type: pfam
Location: 601899 - 602093 (-)
Gene ID: HRGMv2_3547_1_581
Type: pfam
Location: 602110 - 602628 (-)
Gene ID: HRGMv2_3547_1_582
Type: TC
Location: 602625 - 603539 (-)
Gene ID: HRGMv2_3547_1_583
Type: pfam
Location: 603874 - 607155 (-)
Gene ID: HRGMv2_3547_1_584
Type: TC
Location: 607273 - 608280 (-)
Gene ID: HRGMv2_3547_1_585
Type: CAZyme
Location: 608353 - 609990 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
TANB77
→
Family
CAG-465
→
Genus
CAG-465
→
Species
CAG-465 sp000433755

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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