Cluster: HRGMv2_3547_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3547
- CGC Family ID: CGCFAM_02260
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3547_1 | HRGMv2_3547_1_13 | 15734 | 16747 | + | 9.B.157.1.2 |
| TC | HRGMv2_3547_1 | HRGMv2_3547_1_14 | 16760 | 17605 | + | 9.B.157.1.2 |
| pfam | HRGMv2_3547_1 | HRGMv2_3547_1_15 | 17619 | 18137 | + | MreD |
| pfam | HRGMv2_3547_1 | HRGMv2_3547_1_16 | 18207 | 20282 | + | Transpeptidase | PBP_dimer |
| CAZyme | HRGMv2_3547_1 | HRGMv2_3547_1_17 | 20305 | 21243 | + | GT2 |
Gene ID: HRGMv2_3547_1_13
Type: TC
Location: 15734 - 16747 (+)
Type: TC
Location: 15734 - 16747 (+)
Gene ID: HRGMv2_3547_1_14
Type: TC
Location: 16760 - 17605 (+)
Type: TC
Location: 16760 - 17605 (+)
Gene ID: HRGMv2_3547_1_15
Type: pfam
Location: 17619 - 18137 (+)
Type: pfam
Location: 17619 - 18137 (+)
Gene ID: HRGMv2_3547_1_16
Type: pfam
Location: 18207 - 20282 (+)
Type: pfam
Location: 18207 - 20282 (+)
Gene ID: HRGMv2_3547_1_17
Type: CAZyme
Location: 20305 - 21243 (+)
Type: CAZyme
Location: 20305 - 21243 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-465
Genus
CAG-465
Species
CAG-465 sp000433755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.