Cluster: HRGMv2_3546_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3546
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3546_1 | HRGMv2_3546_1_145 | 154134 | 155192 | - | 4.D.2.1.5 |
| pfam | HRGMv2_3546_1 | HRGMv2_3546_1_146 | 155236 | 156009 | - | Acyltransferase |
| CAZyme | HRGMv2_3546_1 | HRGMv2_3546_1_147 | 156002 | 157867 | - | GT8 |
| CAZyme | HRGMv2_3546_1 | HRGMv2_3546_1_148 | 157868 | 158707 | - | GT8 |
Gene ID: HRGMv2_3546_1_145
Type: TC
Location: 154134 - 155192 (-)
Type: TC
Location: 154134 - 155192 (-)
Gene ID: HRGMv2_3546_1_146
Type: pfam
Location: 155236 - 156009 (-)
Type: pfam
Location: 155236 - 156009 (-)
Gene ID: HRGMv2_3546_1_147
Type: CAZyme
Location: 156002 - 157867 (-)
Type: CAZyme
Location: 156002 - 157867 (-)
Gene ID: HRGMv2_3546_1_148
Type: CAZyme
Location: 157868 - 158707 (-)
Type: CAZyme
Location: 157868 - 158707 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-269
Species
CAG-269 sp934130705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3546_1_147 | vegan > omnivore | 1.37780 | 0.00397 |
| HRGMv2_3546_1_148 | vegan > omnivore | 1.12783 | 0.00397 |