Cluster: HRGMv2_3546_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3546
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3546_1 | HRGMv2_3546_1_49 | 49416 | 50873 | + | GH13_5 |
| TC | HRGMv2_3546_1 | HRGMv2_3546_1_50 | 50866 | 51540 | + | 1.C.113.1.1 |
| TC | HRGMv2_3546_1 | HRGMv2_3546_1_51 | 51630 | 54251 | + | 8.A.3.2.1 |
| TC | HRGMv2_3546_1 | HRGMv2_3546_1_52 | 54319 | 55608 | + | 9.A.40.2.2 |
Gene ID: HRGMv2_3546_1_49
Type: CAZyme
Location: 49416 - 50873 (+)
Type: CAZyme
Location: 49416 - 50873 (+)
Gene ID: HRGMv2_3546_1_50
Type: TC
Location: 50866 - 51540 (+)
Type: TC
Location: 50866 - 51540 (+)
Gene ID: HRGMv2_3546_1_51
Type: TC
Location: 51630 - 54251 (+)
Type: TC
Location: 51630 - 54251 (+)
Gene ID: HRGMv2_3546_1_52
Type: TC
Location: 54319 - 55608 (+)
Type: TC
Location: 54319 - 55608 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-269
Species
CAG-269 sp934130705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3546_1_49 | vegan > omnivore | 2.64164 | 0.00397 |