Cluster: HRGMv2_3546_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3546
- CGC Family ID: CGCFAM_00036
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3546_1 | HRGMv2_3546_1_29 | 27439 | 28203 | + | GT111 |
| TC | HRGMv2_3546_1 | HRGMv2_3546_1_30 | 28200 | 29657 | + | 2.A.66.2.16 |
| pfam | HRGMv2_3546_1 | HRGMv2_3546_1_31 | 29650 | 30798 | + | FAD_binding_2 | Amino_oxidase | GLF | NAD_binding_8 |
| pfam | HRGMv2_3546_1 | HRGMv2_3546_1_32 | 30818 | 31312 | + | VanZ |
| TC | HRGMv2_3546_1 | HRGMv2_3546_1_33 | 31389 | 32102 | + | 8.A.3.2.3 |
| TC | HRGMv2_3546_1 | HRGMv2_3546_1_34 | 32102 | 32857 | + | 8.A.3.2.1 |
Gene ID: HRGMv2_3546_1_29
Type: CAZyme
Location: 27439 - 28203 (+)
Type: CAZyme
Location: 27439 - 28203 (+)
Gene ID: HRGMv2_3546_1_30
Type: TC
Location: 28200 - 29657 (+)
Type: TC
Location: 28200 - 29657 (+)
Gene ID: HRGMv2_3546_1_31
Type: pfam
Location: 29650 - 30798 (+)
Type: pfam
Location: 29650 - 30798 (+)
Gene ID: HRGMv2_3546_1_32
Type: pfam
Location: 30818 - 31312 (+)
Type: pfam
Location: 30818 - 31312 (+)
Gene ID: HRGMv2_3546_1_33
Type: TC
Location: 31389 - 32102 (+)
Type: TC
Location: 31389 - 32102 (+)
Gene ID: HRGMv2_3546_1_34
Type: TC
Location: 32102 - 32857 (+)
Type: TC
Location: 32102 - 32857 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-269
Species
CAG-269 sp934130705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.