Cluster: HRGMv2_3546_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3546
- CGC Family ID: CGCFAM_10390
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3546_16 | HRGMv2_3546_16_13 | 9150 | 11771 | + | 3.A.3.4.1 |
| pfam | HRGMv2_3546_16 | HRGMv2_3546_16_14 | 11799 | 13295 | + | Glucos_trans_II |
| sulfatase | HRGMv2_3546_16 | HRGMv2_3546_16_15 | 13318 | 16023 | + | S1_2 |
| CAZyme | HRGMv2_3546_16 | HRGMv2_3546_16_16 | 16050 | 16616 | + | GH23 |
Gene ID: HRGMv2_3546_16_13
Type: TC
Location: 9150 - 11771 (+)
Type: TC
Location: 9150 - 11771 (+)
Gene ID: HRGMv2_3546_16_14
Type: pfam
Location: 11799 - 13295 (+)
Type: pfam
Location: 11799 - 13295 (+)
Gene ID: HRGMv2_3546_16_15
Type: sulfatase
Location: 13318 - 16023 (+)
Type: sulfatase
Location: 13318 - 16023 (+)
Gene ID: HRGMv2_3546_16_16
Type: CAZyme
Location: 16050 - 16616 (+)
Type: CAZyme
Location: 16050 - 16616 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-269
Species
CAG-269 sp934130705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3546_16_13 | vegan > omnivore | 1.11490 | 0.00397 |