Cluster: HRGMv2_3546_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3546
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3546_13 | HRGMv2_3546_13_10 | 8232 | 8450 | + | 3.A.1.134.12 |
| TC | HRGMv2_3546_13 | HRGMv2_3546_13_11 | 8440 | 10527 | + | 3.A.1.134.7 |
| CAZyme | HRGMv2_3546_13 | HRGMv2_3546_13_12 | 10630 | 11331 | + | GT51 |
| TC | HRGMv2_3546_13 | HRGMv2_3546_13_13 | 11451 | 11810 | + | 9.B.55.2.1 |
Gene ID: HRGMv2_3546_13_10
Type: TC
Location: 8232 - 8450 (+)
Type: TC
Location: 8232 - 8450 (+)
Gene ID: HRGMv2_3546_13_11
Type: TC
Location: 8440 - 10527 (+)
Type: TC
Location: 8440 - 10527 (+)
Gene ID: HRGMv2_3546_13_12
Type: CAZyme
Location: 10630 - 11331 (+)
Type: CAZyme
Location: 10630 - 11331 (+)
Gene ID: HRGMv2_3546_13_13
Type: TC
Location: 11451 - 11810 (+)
Type: TC
Location: 11451 - 11810 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-269
Species
CAG-269 sp934130705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3546_13_12 | vegan > omnivore | 1.06528 | 0.00397 |