Cluster: HRGMv2_3546_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3546
- CGC Family ID: CGCFAM_04560
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3546_5 | HRGMv2_3546_5_86 | 75258 | 77405 | - | 9.A.8.1.5 |
| NULL(UNKNOWN) | HRGMv2_3546_5 | HRGMv2_3546_5_87 | 77521 | 78015 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_3546_5 | HRGMv2_3546_5_88 | 78277 | 80607 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3546_5 | HRGMv2_3546_5_89 | 80626 | 81546 | - | CE4 |
Gene ID: HRGMv2_3546_5_86
Type: TC
Location: 75258 - 77405 (-)
Type: TC
Location: 75258 - 77405 (-)
Gene ID: HRGMv2_3546_5_87
Type:
Location: 77521 - 78015 (-)
Type:
Location: 77521 - 78015 (-)
Gene ID: HRGMv2_3546_5_88
Type:
Location: 78277 - 80607 (-)
Type:
Location: 78277 - 80607 (-)
Gene ID: HRGMv2_3546_5_89
Type: CAZyme
Location: 80626 - 81546 (-)
Type: CAZyme
Location: 80626 - 81546 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-269
Species
CAG-269 sp934130705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3546_5_86 | vegan > omnivore | 1.34505 | 0.00397 |