Cluster: HRGMv2_3546_CGC11
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3546
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3546_4 | HRGMv2_3546_4_72 | 63849 | 64661 | - | CE4 |
| TF | HRGMv2_3546_4 | HRGMv2_3546_4_73 | 64929 | 65642 | + | LytTR |
| TC | HRGMv2_3546_4 | HRGMv2_3546_4_74 | 65626 | 66975 | + | 9.B.14.1.13 |
Gene ID: HRGMv2_3546_4_72
Type: CAZyme
Location: 63849 - 64661 (-)
Type: CAZyme
Location: 63849 - 64661 (-)
Gene ID: HRGMv2_3546_4_73
Type: TF
Location: 64929 - 65642 (+)
Type: TF
Location: 64929 - 65642 (+)
Gene ID: HRGMv2_3546_4_74
Type: TC
Location: 65626 - 66975 (+)
Type: TC
Location: 65626 - 66975 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-269
Species
CAG-269 sp934130705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3546_4_72 | vegan > omnivore | 1.41776 | 0.00397 |
| HRGMv2_3546_4_73 | vegan > omnivore | 1.89427 | 0.00397 |