Cluster: HRGMv2_3546_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3546
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3546_3 | HRGMv2_3546_3_5 | 3057 | 4961 | - | GH15 |
| pfam | HRGMv2_3546_3 | HRGMv2_3546_3_6 | 4966 | 6612 | - | Lactamase_B | RMMBL | Beta-Casp | Lactamase_B_6 |
| NULL(UNKNOWN) | HRGMv2_3546_3 | HRGMv2_3546_3_7 | 6636 | 8201 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3546_3 | HRGMv2_3546_3_8 | 8218 | 10668 | - | 3.A.12.1.1 |
Gene ID: HRGMv2_3546_3_5
Type: CAZyme
Location: 3057 - 4961 (-)
Type: CAZyme
Location: 3057 - 4961 (-)
Gene ID: HRGMv2_3546_3_6
Type: pfam
Location: 4966 - 6612 (-)
Type: pfam
Location: 4966 - 6612 (-)
Gene ID: HRGMv2_3546_3_7
Type:
Location: 6636 - 8201 (-)
Type:
Location: 6636 - 8201 (-)
Gene ID: HRGMv2_3546_3_8
Type: TC
Location: 8218 - 10668 (-)
Type: TC
Location: 8218 - 10668 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-269
Species
CAG-269 sp934130705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3546_3_5 | vegan > omnivore | 1.30420 | 0.00397 |