Cluster: HRGMv2_3546_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3546
- CGC Family ID: CGCFAM_00002
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3546_1 | HRGMv2_3546_1_20 | 18504 | 19214 | + | 9.B.18.1.2 |
| CAZyme | HRGMv2_3546_1 | HRGMv2_3546_1_21 | 19216 | 20340 | + | GT4 |
| CAZyme | HRGMv2_3546_1 | HRGMv2_3546_1_22 | 20351 | 21463 | + | GT4 |
| pfam | HRGMv2_3546_1 | HRGMv2_3546_1_23 | 21473 | 22594 | + | EpsG |
| CAZyme | HRGMv2_3546_1 | HRGMv2_3546_1_24 | 22599 | 23582 | + | GT2 |
Gene ID: HRGMv2_3546_1_20
Type: TC
Location: 18504 - 19214 (+)
Type: TC
Location: 18504 - 19214 (+)
Gene ID: HRGMv2_3546_1_21
Type: CAZyme
Location: 19216 - 20340 (+)
Type: CAZyme
Location: 19216 - 20340 (+)
Gene ID: HRGMv2_3546_1_22
Type: CAZyme
Location: 20351 - 21463 (+)
Type: CAZyme
Location: 20351 - 21463 (+)
Gene ID: HRGMv2_3546_1_23
Type: pfam
Location: 21473 - 22594 (+)
Type: pfam
Location: 21473 - 22594 (+)
Gene ID: HRGMv2_3546_1_24
Type: CAZyme
Location: 22599 - 23582 (+)
Type: CAZyme
Location: 22599 - 23582 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-269
Species
CAG-269 sp934130705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.