Cluster: HRGMv2_3545_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3545
- CGC Family ID: CGCFAM_04090
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3545_18 | HRGMv2_3545_18_2 | 978 | 1445 | - | CBM25 |
| pfam | HRGMv2_3545_18 | HRGMv2_3545_18_3 | 1699 | 3534 | + | VanW | G5 | PG_binding_4 |
| TC | HRGMv2_3545_18 | HRGMv2_3545_18_4 | 3571 | 4521 | - | 1.A.35.3.1 |
Gene ID: HRGMv2_3545_18_2
Type: CAZyme
Location: 978 - 1445 (-)
Type: CAZyme
Location: 978 - 1445 (-)
Gene ID: HRGMv2_3545_18_3
Type: pfam
Location: 1699 - 3534 (+)
Type: pfam
Location: 1699 - 3534 (+)
Gene ID: HRGMv2_3545_18_4
Type: TC
Location: 3571 - 4521 (-)
Type: TC
Location: 3571 - 4521 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-269
Species
CAG-269 sp001916005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3545_18_4 | vegan > omnivore | 2.41904 | 0.00313 |