Cluster: HRGMv2_3545_CGC5
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 6
- Substrate:
- Genome ID: HRGMv2_3545
- CGC Family ID: CGCFAM_02199
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3545_17 | HRGMv2_3545_17_3 | 1473 | 2609 | - | GT4 |
| CAZyme | HRGMv2_3545_17 | HRGMv2_3545_17_4 | 2621 | 3541 | - | GT2 |
| pfam | HRGMv2_3545_17 | HRGMv2_3545_17_5 | 3566 | 3907 | - | DUF2304 |
| CAZyme | HRGMv2_3545_17 | HRGMv2_3545_17_6 | 3920 | 4609 | - | GT2 |
| pfam | HRGMv2_3545_17 | HRGMv2_3545_17_7 | 4651 | 6795 | - | DUF7654 | DUF7657 |
| CAZyme | HRGMv2_3545_17 | HRGMv2_3545_17_8 | 6819 | 8660 | - | GT2 | GT2 |
| NULL(UNKNOWN) | HRGMv2_3545_17 | HRGMv2_3545_17_9 | 8684 | 10402 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3545_17 | HRGMv2_3545_17_10 | 10428 | 11330 | - | Lactamase_B |
| TC | HRGMv2_3545_17 | HRGMv2_3545_17_11 | 11332 | 12660 | - | 3.A.1.103.6 |
| CAZyme | HRGMv2_3545_17 | HRGMv2_3545_17_12 | 12691 | 13668 | - | GT2 |
| pfam | HRGMv2_3545_17 | HRGMv2_3545_17_13 | 13695 | 14486 | - | ABC2_membrane |
| CAZyme | HRGMv2_3545_17 | HRGMv2_3545_17_14 | 14865 | 15875 | - | GT2 |
Gene ID: HRGMv2_3545_17_3
Type: CAZyme
Location: 1473 - 2609 (-)
Type: CAZyme
Location: 1473 - 2609 (-)
Gene ID: HRGMv2_3545_17_4
Type: CAZyme
Location: 2621 - 3541 (-)
Type: CAZyme
Location: 2621 - 3541 (-)
Gene ID: HRGMv2_3545_17_5
Type: pfam
Location: 3566 - 3907 (-)
Type: pfam
Location: 3566 - 3907 (-)
Gene ID: HRGMv2_3545_17_6
Type: CAZyme
Location: 3920 - 4609 (-)
Type: CAZyme
Location: 3920 - 4609 (-)
Gene ID: HRGMv2_3545_17_7
Type: pfam
Location: 4651 - 6795 (-)
Type: pfam
Location: 4651 - 6795 (-)
Gene ID: HRGMv2_3545_17_8
Type: CAZyme
Location: 6819 - 8660 (-)
Type: CAZyme
Location: 6819 - 8660 (-)
Gene ID: HRGMv2_3545_17_9
Type:
Location: 8684 - 10402 (-)
Type:
Location: 8684 - 10402 (-)
Gene ID: HRGMv2_3545_17_10
Type: pfam
Location: 10428 - 11330 (-)
Type: pfam
Location: 10428 - 11330 (-)
Gene ID: HRGMv2_3545_17_11
Type: TC
Location: 11332 - 12660 (-)
Type: TC
Location: 11332 - 12660 (-)
Gene ID: HRGMv2_3545_17_12
Type: CAZyme
Location: 12691 - 13668 (-)
Type: CAZyme
Location: 12691 - 13668 (-)
Gene ID: HRGMv2_3545_17_13
Type: pfam
Location: 13695 - 14486 (-)
Type: pfam
Location: 13695 - 14486 (-)
Gene ID: HRGMv2_3545_17_14
Type: CAZyme
Location: 14865 - 15875 (-)
Type: CAZyme
Location: 14865 - 15875 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-269
Species
CAG-269 sp001916005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.