Cluster: HRGMv2_3545_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3545
- CGC Family ID: CGCFAM_00713
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3545_11 | HRGMv2_3545_11_27 | 27671 | 28276 | - | 3.A.3.4.1 |
| TC | HRGMv2_3545_11 | HRGMv2_3545_11_28 | 28296 | 30281 | - | 3.A.3.4.1 |
| pfam | HRGMv2_3545_11 | HRGMv2_3545_11_29 | 30642 | 31631 | - | Semialdhyde_dh | Semialdhyde_dhC |
| pfam | HRGMv2_3545_11 | HRGMv2_3545_11_30 | 31813 | 33330 | + | FGE-sulfatase |
| CAZyme | HRGMv2_3545_11 | HRGMv2_3545_11_31 | 33632 | 34903 | + | GT2 |
Gene ID: HRGMv2_3545_11_27
Type: TC
Location: 27671 - 28276 (-)
Type: TC
Location: 27671 - 28276 (-)
Gene ID: HRGMv2_3545_11_28
Type: TC
Location: 28296 - 30281 (-)
Type: TC
Location: 28296 - 30281 (-)
Gene ID: HRGMv2_3545_11_29
Type: pfam
Location: 30642 - 31631 (-)
Type: pfam
Location: 30642 - 31631 (-)
Gene ID: HRGMv2_3545_11_30
Type: pfam
Location: 31813 - 33330 (+)
Type: pfam
Location: 31813 - 33330 (+)
Gene ID: HRGMv2_3545_11_31
Type: CAZyme
Location: 33632 - 34903 (+)
Type: CAZyme
Location: 33632 - 34903 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-269
Species
CAG-269 sp001916005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.