Cluster: HRGMv2_3544_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3544
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3544_19 | HRGMv2_3544_19_7 | 5769 | 6734 | - | 8.A.3.2.1 |
| TC | HRGMv2_3544_19 | HRGMv2_3544_19_8 | 6734 | 7456 | - | 8.A.3.2.1 |
| pfam | HRGMv2_3544_19 | HRGMv2_3544_19_9 | 7629 | 8795 | - | UDPG_MGDP_dh | NAD_Gly3P_dh_N | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N |
| TC | HRGMv2_3544_19 | HRGMv2_3544_19_10 | 8829 | 10253 | - | 2.A.66.2.16 |
| CAZyme | HRGMv2_3544_19 | HRGMv2_3544_19_11 | 10231 | 11256 | - | GT8 |
| pfam | HRGMv2_3544_19 | HRGMv2_3544_19_12 | 11256 | 12305 | - | DUF6625 |
| CAZyme | HRGMv2_3544_19 | HRGMv2_3544_19_13 | 12307 | 13410 | - | GT4 |
Gene ID: HRGMv2_3544_19_7
Type: TC
Location: 5769 - 6734 (-)
Type: TC
Location: 5769 - 6734 (-)
Gene ID: HRGMv2_3544_19_8
Type: TC
Location: 6734 - 7456 (-)
Type: TC
Location: 6734 - 7456 (-)
Gene ID: HRGMv2_3544_19_9
Type: pfam
Location: 7629 - 8795 (-)
Type: pfam
Location: 7629 - 8795 (-)
Gene ID: HRGMv2_3544_19_10
Type: TC
Location: 8829 - 10253 (-)
Type: TC
Location: 8829 - 10253 (-)
Gene ID: HRGMv2_3544_19_11
Type: CAZyme
Location: 10231 - 11256 (-)
Type: CAZyme
Location: 10231 - 11256 (-)
Gene ID: HRGMv2_3544_19_12
Type: pfam
Location: 11256 - 12305 (-)
Type: pfam
Location: 11256 - 12305 (-)
Gene ID: HRGMv2_3544_19_13
Type: CAZyme
Location: 12307 - 13410 (-)
Type: CAZyme
Location: 12307 - 13410 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-269
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.