Cluster: HRGMv2_3543_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3543
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3543_2 | HRGMv2_3543_2_185 | 228340 | 230778 | + | 3.A.12.1.1 |
| NULL(UNKNOWN) | HRGMv2_3543_2 | HRGMv2_3543_2_186 | 230861 | 232444 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3543_2 | HRGMv2_3543_2_187 | 232463 | 234106 | + | Lactamase_B | RMMBL | Beta-Casp | Lactamase_B_2 | Lactamase_B_6 |
| CAZyme | HRGMv2_3543_2 | HRGMv2_3543_2_188 | 234254 | 236218 | + | GH15 |
Gene ID: HRGMv2_3543_2_185
Type: TC
Location: 228340 - 230778 (+)
Type: TC
Location: 228340 - 230778 (+)
Gene ID: HRGMv2_3543_2_186
Type:
Location: 230861 - 232444 (+)
Type:
Location: 230861 - 232444 (+)
Gene ID: HRGMv2_3543_2_187
Type: pfam
Location: 232463 - 234106 (+)
Type: pfam
Location: 232463 - 234106 (+)
Gene ID: HRGMv2_3543_2_188
Type: CAZyme
Location: 234254 - 236218 (+)
Type: CAZyme
Location: 234254 - 236218 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-269
Species
CAG-269 sp900553985
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.