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Cluster: HRGMv2_3543_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3543_2 HRGMv2_3543_2_85 112897 115101 - 2.A.16.2.2
pfam HRGMv2_3543_2 HRGMv2_3543_2_86 115283 117028 + DnaB_C
pfam HRGMv2_3543_2 HRGMv2_3543_2_87 117368 117685 + DUF6514
TC HRGMv2_3543_2 HRGMv2_3543_2_88 118055 120130 + 3.A.7.7.1
pfam HRGMv2_3543_2 HRGMv2_3543_2_89 120394 121698 + AAA_14 | DUF4143
pfam HRGMv2_3543_2 HRGMv2_3543_2_90 121894 122622 + Metallophos | Metallophos_2
CAZyme HRGMv2_3543_2 HRGMv2_3543_2_91 122930 123700 + CE4
Gene ID: HRGMv2_3543_2_85
Type: TC
Location: 112897 - 115101 (-)
Gene ID: HRGMv2_3543_2_86
Type: pfam
Location: 115283 - 117028 (+)
Gene ID: HRGMv2_3543_2_87
Type: pfam
Location: 117368 - 117685 (+)
Gene ID: HRGMv2_3543_2_88
Type: TC
Location: 118055 - 120130 (+)
Gene ID: HRGMv2_3543_2_89
Type: pfam
Location: 120394 - 121698 (+)
Gene ID: HRGMv2_3543_2_90
Type: pfam
Location: 121894 - 122622 (+)
Gene ID: HRGMv2_3543_2_91
Type: CAZyme
Location: 122930 - 123700 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
TANB77
→
Family
CAG-508
→
Genus
CAG-269
→
Species
CAG-269 sp900553985

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_3543_2_91 vegan > omnivore 1.63036 0.00958

🧭 Explore Read Mapping of CGC

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