Cluster: HRGMv2_3543_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3543
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3543_2 | HRGMv2_3543_2_60 | 88095 | 89294 | + | CE4 |
| pfam | HRGMv2_3543_2 | HRGMv2_3543_2_61 | 89518 | 90879 | + | LytR_cpsA_psr | LytR_C |
| peptidase | HRGMv2_3543_2 | HRGMv2_3543_2_62 | 91128 | 92390 | - | S11.UPW |
| TC | HRGMv2_3543_2 | HRGMv2_3543_2_63 | 92616 | 93284 | + | 3.A.11.1.2 |
| TF | HRGMv2_3543_2 | HRGMv2_3543_2_64 | 93537 | 94013 | + | Fe_dep_repress |
| TC | HRGMv2_3543_2 | HRGMv2_3543_2_65 | 94061 | 94765 | + | 3.A.1.1.15 |
Gene ID: HRGMv2_3543_2_60
Type: CAZyme
Location: 88095 - 89294 (+)
Type: CAZyme
Location: 88095 - 89294 (+)
Gene ID: HRGMv2_3543_2_61
Type: pfam
Location: 89518 - 90879 (+)
Type: pfam
Location: 89518 - 90879 (+)
Gene ID: HRGMv2_3543_2_62
Type: peptidase
Location: 91128 - 92390 (-)
Type: peptidase
Location: 91128 - 92390 (-)
Gene ID: HRGMv2_3543_2_63
Type: TC
Location: 92616 - 93284 (+)
Type: TC
Location: 92616 - 93284 (+)
Gene ID: HRGMv2_3543_2_64
Type: TF
Location: 93537 - 94013 (+)
Type: TF
Location: 93537 - 94013 (+)
Gene ID: HRGMv2_3543_2_65
Type: TC
Location: 94061 - 94765 (+)
Type: TC
Location: 94061 - 94765 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-269
Species
CAG-269 sp900553985
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.