Cluster: HRGMv2_3543_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3543
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3543_1 | HRGMv2_3543_1_144 | 157993 | 158760 | + | 3.A.1.134.12 |
| TC | HRGMv2_3543_1 | HRGMv2_3543_1_145 | 158750 | 160843 | + | 3.A.1.134.2 |
| CAZyme | HRGMv2_3543_1 | HRGMv2_3543_1_146 | 160930 | 161622 | + | GT51 |
| STP | HRGMv2_3543_1 | HRGMv2_3543_1_147 | 161733 | 162296 | - | TetR_N |
| TC | HRGMv2_3543_1 | HRGMv2_3543_1_148 | 162497 | 164539 | + | 9.B.74.1.3 |
Gene ID: HRGMv2_3543_1_144
Type: TC
Location: 157993 - 158760 (+)
Type: TC
Location: 157993 - 158760 (+)
Gene ID: HRGMv2_3543_1_145
Type: TC
Location: 158750 - 160843 (+)
Type: TC
Location: 158750 - 160843 (+)
Gene ID: HRGMv2_3543_1_146
Type: CAZyme
Location: 160930 - 161622 (+)
Type: CAZyme
Location: 160930 - 161622 (+)
Gene ID: HRGMv2_3543_1_147
Type: STP
Location: 161733 - 162296 (-)
Type: STP
Location: 161733 - 162296 (-)
Gene ID: HRGMv2_3543_1_148
Type: TC
Location: 162497 - 164539 (+)
Type: TC
Location: 162497 - 164539 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-269
Species
CAG-269 sp900553985
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3543_1_144 | vegan > omnivore | 1.15340 | 0.00958 |