Cluster: HRGMv2_3543_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3543
- CGC Family ID: CGCFAM_02244
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3543_9 | HRGMv2_3543_9_29 | 31418 | 32107 | + | GT51 |
| CAZyme | HRGMv2_3543_9 | HRGMv2_3543_9_30 | 32352 | 33143 | + | CE4 |
| pfam | HRGMv2_3543_9 | HRGMv2_3543_9_31 | 33474 | 33731 | - | TSCPD |
| pfam | HRGMv2_3543_9 | HRGMv2_3543_9_32 | 33816 | 35570 | - | tRNA-synt_2 | tRNA_anti-codon | GAD |
| TC | HRGMv2_3543_9 | HRGMv2_3543_9_33 | 35819 | 36766 | + | 8.A.59.4.1 |
Gene ID: HRGMv2_3543_9_29
Type: CAZyme
Location: 31418 - 32107 (+)
Type: CAZyme
Location: 31418 - 32107 (+)
Gene ID: HRGMv2_3543_9_30
Type: CAZyme
Location: 32352 - 33143 (+)
Type: CAZyme
Location: 32352 - 33143 (+)
Gene ID: HRGMv2_3543_9_31
Type: pfam
Location: 33474 - 33731 (-)
Type: pfam
Location: 33474 - 33731 (-)
Gene ID: HRGMv2_3543_9_32
Type: pfam
Location: 33816 - 35570 (-)
Type: pfam
Location: 33816 - 35570 (-)
Gene ID: HRGMv2_3543_9_33
Type: TC
Location: 35819 - 36766 (+)
Type: TC
Location: 35819 - 36766 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-269
Species
CAG-269 sp900553985
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.