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Cluster: HRGMv2_3543_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3543_5 HRGMv2_3543_5_71 69212 70102 + GT2
pfam HRGMv2_3543_5 HRGMv2_3543_5_72 70175 71545 + Glyco_transf_4 | Glyco_trans_4_4 | Glyco_trans_1_4
CAZyme HRGMv2_3543_5 HRGMv2_3543_5_73 71572 74727 + GT2
TC HRGMv2_3543_5 HRGMv2_3543_5_74 74729 75472 + 3.A.1.103.4
TC HRGMv2_3543_5 HRGMv2_3543_5_75 75485 76261 + 3.A.1.103.1
pfam HRGMv2_3543_5 HRGMv2_3543_5_76 76276 78228 + GtrA_DPMS_TM | Glucos_trans_II
CAZyme HRGMv2_3543_5 HRGMv2_3543_5_77 78481 80967 + CBM13
CAZyme HRGMv2_3543_5 HRGMv2_3543_5_78 80985 84491 + CBM13
Gene ID: HRGMv2_3543_5_71
Type: CAZyme
Location: 69212 - 70102 (+)
Gene ID: HRGMv2_3543_5_72
Type: pfam
Location: 70175 - 71545 (+)
Gene ID: HRGMv2_3543_5_73
Type: CAZyme
Location: 71572 - 74727 (+)
Gene ID: HRGMv2_3543_5_74
Type: TC
Location: 74729 - 75472 (+)
Gene ID: HRGMv2_3543_5_75
Type: TC
Location: 75485 - 76261 (+)
Gene ID: HRGMv2_3543_5_76
Type: pfam
Location: 76276 - 78228 (+)
Gene ID: HRGMv2_3543_5_77
Type: CAZyme
Location: 78481 - 80967 (+)
Gene ID: HRGMv2_3543_5_78
Type: CAZyme
Location: 80985 - 84491 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
TANB77
→
Family
CAG-508
→
Genus
CAG-269
→
Species
CAG-269 sp900553985

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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