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Cluster: HRGMv2_3543_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3543_4 HRGMv2_3543_4_116 127081 128817 - GH18
pfam HRGMv2_3543_4 HRGMv2_3543_4_117 128979 129680 - DNA_alkylation
TC HRGMv2_3543_4 HRGMv2_3543_4_118 129882 131969 - 3.A.3.6.10
TF HRGMv2_3543_4 HRGMv2_3543_4_119 131956 132309 - HTH_5
TC HRGMv2_3543_4 HRGMv2_3543_4_120 132461 133126 + 1.A.14.2.2
TC HRGMv2_3543_4 HRGMv2_3543_4_121 133145 133984 - 3.A.1.135.7
TC HRGMv2_3543_4 HRGMv2_3543_4_122 134007 134975 - 3.A.1.135.6
TC HRGMv2_3543_4 HRGMv2_3543_4_123 134976 137243 - 3.A.1.135.6
Gene ID: HRGMv2_3543_4_116
Type: CAZyme
Location: 127081 - 128817 (-)
Gene ID: HRGMv2_3543_4_117
Type: pfam
Location: 128979 - 129680 (-)
Gene ID: HRGMv2_3543_4_118
Type: TC
Location: 129882 - 131969 (-)
Gene ID: HRGMv2_3543_4_119
Type: TF
Location: 131956 - 132309 (-)
Gene ID: HRGMv2_3543_4_120
Type: TC
Location: 132461 - 133126 (+)
Gene ID: HRGMv2_3543_4_121
Type: TC
Location: 133145 - 133984 (-)
Gene ID: HRGMv2_3543_4_122
Type: TC
Location: 134007 - 134975 (-)
Gene ID: HRGMv2_3543_4_123
Type: TC
Location: 134976 - 137243 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
TANB77
→
Family
CAG-508
→
Genus
CAG-269
→
Species
CAG-269 sp900553985

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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