Cluster: HRGMv2_3543_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3543
- CGC Family ID: CGCFAM_00007
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3543_1 | HRGMv2_3543_1_18 | 17467 | 18570 | + | GT4 |
| pfam | HRGMv2_3543_1 | HRGMv2_3543_1_19 | 18572 | 19621 | + | DUF6625 |
| CAZyme | HRGMv2_3543_1 | HRGMv2_3543_1_20 | 19621 | 20646 | + | GT8 |
| TC | HRGMv2_3543_1 | HRGMv2_3543_1_21 | 20624 | 22048 | + | 2.A.66.2.16 |
| pfam | HRGMv2_3543_1 | HRGMv2_3543_1_22 | 22083 | 23249 | + | UDPG_MGDP_dh | NAD_Gly3P_dh_N | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N |
| TC | HRGMv2_3543_1 | HRGMv2_3543_1_23 | 23423 | 24145 | + | 8.A.3.2.1 |
| TC | HRGMv2_3543_1 | HRGMv2_3543_1_24 | 24145 | 25110 | + | 8.A.3.2.1 |
Gene ID: HRGMv2_3543_1_18
Type: CAZyme
Location: 17467 - 18570 (+)
Type: CAZyme
Location: 17467 - 18570 (+)
Gene ID: HRGMv2_3543_1_19
Type: pfam
Location: 18572 - 19621 (+)
Type: pfam
Location: 18572 - 19621 (+)
Gene ID: HRGMv2_3543_1_20
Type: CAZyme
Location: 19621 - 20646 (+)
Type: CAZyme
Location: 19621 - 20646 (+)
Gene ID: HRGMv2_3543_1_21
Type: TC
Location: 20624 - 22048 (+)
Type: TC
Location: 20624 - 22048 (+)
Gene ID: HRGMv2_3543_1_22
Type: pfam
Location: 22083 - 23249 (+)
Type: pfam
Location: 22083 - 23249 (+)
Gene ID: HRGMv2_3543_1_23
Type: TC
Location: 23423 - 24145 (+)
Type: TC
Location: 23423 - 24145 (+)
Gene ID: HRGMv2_3543_1_24
Type: TC
Location: 24145 - 25110 (+)
Type: TC
Location: 24145 - 25110 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-269
Species
CAG-269 sp900553985
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.