Cluster: HRGMv2_3542_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3542
- CGC Family ID: CGCFAM_01066
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3542_9 | HRGMv2_3542_9_49 | 50501 | 52231 | + | 9.A.11.1.2 |
| pfam | HRGMv2_3542_9 | HRGMv2_3542_9_50 | 52253 | 53365 | + | Spore_permease |
| pfam | HRGMv2_3542_9 | HRGMv2_3542_9_51 | 53369 | 54622 | + | Spore_GerAC |
| TC | HRGMv2_3542_9 | HRGMv2_3542_9_52 | 54671 | 56488 | - | 3.A.16.1.1 |
| pfam | HRGMv2_3542_9 | HRGMv2_3542_9_53 | 56507 | 57562 | - | DUF1189 |
| pfam | HRGMv2_3542_9 | HRGMv2_3542_9_54 | 57578 | 58981 | - | tRNA-synt_1e | tRNA-synt_1g | CysS_C |
| CAZyme | HRGMv2_3542_9 | HRGMv2_3542_9_55 | 59006 | 61609 | - | GT51 |
Gene ID: HRGMv2_3542_9_49
Type: TC
Location: 50501 - 52231 (+)
Type: TC
Location: 50501 - 52231 (+)
Gene ID: HRGMv2_3542_9_50
Type: pfam
Location: 52253 - 53365 (+)
Type: pfam
Location: 52253 - 53365 (+)
Gene ID: HRGMv2_3542_9_51
Type: pfam
Location: 53369 - 54622 (+)
Type: pfam
Location: 53369 - 54622 (+)
Gene ID: HRGMv2_3542_9_52
Type: TC
Location: 54671 - 56488 (-)
Type: TC
Location: 54671 - 56488 (-)
Gene ID: HRGMv2_3542_9_53
Type: pfam
Location: 56507 - 57562 (-)
Type: pfam
Location: 56507 - 57562 (-)
Gene ID: HRGMv2_3542_9_54
Type: pfam
Location: 57578 - 58981 (-)
Type: pfam
Location: 57578 - 58981 (-)
Gene ID: HRGMv2_3542_9_55
Type: CAZyme
Location: 59006 - 61609 (-)
Type: CAZyme
Location: 59006 - 61609 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
UMGS1901
Species
UMGS1901 sp900553755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.