Cluster: HRGMv2_3542_CGC2
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 9
- Substrate:
- Genome ID: HRGMv2_3542
- CGC Family ID: CGCFAM_01049
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3542_5 | HRGMv2_3542_5_10 | 9132 | 10076 | - | GT2 |
| TC | HRGMv2_3542_5 | HRGMv2_3542_5_11 | 10078 | 11184 | - | 9.B.146.1.1 |
| pfam | HRGMv2_3542_5 | HRGMv2_3542_5_12 | 11207 | 12082 | - | Cadherin-like | Cadherin-like |
| CAZyme | HRGMv2_3542_5 | HRGMv2_3542_5_13 | 12105 | 14936 | - | CBM13 | CBM13 | CBM13 |
| pfam | HRGMv2_3542_5 | HRGMv2_3542_5_14 | 15088 | 16668 | - | Amino_oxidase | NAD_binding_8 |
| pfam | HRGMv2_3542_5 | HRGMv2_3542_5_15 | 16683 | 17999 | - | PMT_2 |
| CAZyme | HRGMv2_3542_5 | HRGMv2_3542_5_16 | 18022 | 20220 | - | GT2 | GT4 |
| CAZyme | HRGMv2_3542_5 | HRGMv2_3542_5_17 | 20243 | 21535 | - | GT2 |
| pfam | HRGMv2_3542_5 | HRGMv2_3542_5_18 | 21546 | 22559 | - | Glycos_transf_1 | Glyco_trans_1_4 |
| NULL(UNKNOWN) | HRGMv2_3542_5 | HRGMv2_3542_5_19 | 22569 | 22784 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3542_5 | HRGMv2_3542_5_20 | 22816 | 23589 | - | 3.A.1.103.1 |
| TC | HRGMv2_3542_5 | HRGMv2_3542_5_21 | 23618 | 24361 | - | 3.A.1.103.4 |
| CAZyme | HRGMv2_3542_5 | HRGMv2_3542_5_22 | 24415 | 25311 | - | GT2 |
| CAZyme | HRGMv2_3542_5 | HRGMv2_3542_5_23 | 25308 | 26441 | - | GT4 |
| pfam | HRGMv2_3542_5 | HRGMv2_3542_5_24 | 26441 | 27898 | - | O-antigen_lig |
| CAZyme | HRGMv2_3542_5 | HRGMv2_3542_5_25 | 27914 | 28867 | - | GT2 |
| CAZyme | HRGMv2_3542_5 | HRGMv2_3542_5_26 | 28883 | 29827 | - | GT2 |
| CAZyme | HRGMv2_3542_5 | HRGMv2_3542_5_27 | 29831 | 30931 | - | GT4 |
Gene ID: HRGMv2_3542_5_10
Type: CAZyme
Location: 9132 - 10076 (-)
Type: CAZyme
Location: 9132 - 10076 (-)
Gene ID: HRGMv2_3542_5_11
Type: TC
Location: 10078 - 11184 (-)
Type: TC
Location: 10078 - 11184 (-)
Gene ID: HRGMv2_3542_5_12
Type: pfam
Location: 11207 - 12082 (-)
Type: pfam
Location: 11207 - 12082 (-)
Gene ID: HRGMv2_3542_5_13
Type: CAZyme
Location: 12105 - 14936 (-)
Type: CAZyme
Location: 12105 - 14936 (-)
Gene ID: HRGMv2_3542_5_14
Type: pfam
Location: 15088 - 16668 (-)
Type: pfam
Location: 15088 - 16668 (-)
Gene ID: HRGMv2_3542_5_15
Type: pfam
Location: 16683 - 17999 (-)
Type: pfam
Location: 16683 - 17999 (-)
Gene ID: HRGMv2_3542_5_16
Type: CAZyme
Location: 18022 - 20220 (-)
Type: CAZyme
Location: 18022 - 20220 (-)
Gene ID: HRGMv2_3542_5_17
Type: CAZyme
Location: 20243 - 21535 (-)
Type: CAZyme
Location: 20243 - 21535 (-)
Gene ID: HRGMv2_3542_5_18
Type: pfam
Location: 21546 - 22559 (-)
Type: pfam
Location: 21546 - 22559 (-)
Gene ID: HRGMv2_3542_5_19
Type:
Location: 22569 - 22784 (-)
Type:
Location: 22569 - 22784 (-)
Gene ID: HRGMv2_3542_5_20
Type: TC
Location: 22816 - 23589 (-)
Type: TC
Location: 22816 - 23589 (-)
Gene ID: HRGMv2_3542_5_21
Type: TC
Location: 23618 - 24361 (-)
Type: TC
Location: 23618 - 24361 (-)
Gene ID: HRGMv2_3542_5_22
Type: CAZyme
Location: 24415 - 25311 (-)
Type: CAZyme
Location: 24415 - 25311 (-)
Gene ID: HRGMv2_3542_5_23
Type: CAZyme
Location: 25308 - 26441 (-)
Type: CAZyme
Location: 25308 - 26441 (-)
Gene ID: HRGMv2_3542_5_24
Type: pfam
Location: 26441 - 27898 (-)
Type: pfam
Location: 26441 - 27898 (-)
Gene ID: HRGMv2_3542_5_25
Type: CAZyme
Location: 27914 - 28867 (-)
Type: CAZyme
Location: 27914 - 28867 (-)
Gene ID: HRGMv2_3542_5_26
Type: CAZyme
Location: 28883 - 29827 (-)
Type: CAZyme
Location: 28883 - 29827 (-)
Gene ID: HRGMv2_3542_5_27
Type: CAZyme
Location: 29831 - 30931 (-)
Type: CAZyme
Location: 29831 - 30931 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
UMGS1901
Species
UMGS1901 sp900553755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.